AAPPS Association of Asia Pacific Physical Societies
AAPPS Bulletin Vol. 16 No. 3, June 2006
Highlight of the Issue

A Novel Simulation Approach to Forced Unfolding Single RNAs  (PDF, 757KB)
Fei Liu
Center for Advanced Study, Tsinghua University, Beijing, China

 

Abstract
We summarize our recent simulation progress of micromanipulation experiments on RNAs. We mainly consults with two important small RNAs unfolding experiments carried out by Bustamante group. Our results show that, in contrast to protein cases, using the single polymer elastic theory and the well known RNA secondary structure free energy knowledge, we can successively simulate various behaviors of the forced unfolding single RNAs under different experimental setups from equilibrium to far-from equilibrium.
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